Detail

RLID: RLID00000108
RNA Symbol: HOTAIR
RNA Category: lncRNA
Organism: Homo sapiens
Aliase: HOXAS, HOXC-AS4, HOXC11-AS1, NCRNA00072
Sequence:
Network:
Subcellular Localization:
Localization Tissue Validated Method PMID
Nucleus HFF|HLF|HeLa cell Fluorescence in situ hybridization 19571010
Description: Figure 3b: Subcellular localization analysis of lincRNAs by RNA FISH demonstrates localization of lincRNAs to the nucleus. Each panel represents the in situ hybridization of 鈮?0 fluorescently labeled DNA oligos with complementarity to the interrogated lincRNA. RNA FISH experiments were performed in male hFF for each represented lincRNA (XIST, HOTAIR, TUG-1, lincMKLN-1, lincFOXF1, and lincSFPQ), and also in female hLF for XIST (XX). White 鈥渟peckles鈥?indicate the subcellular localization of each lincRNA. The nuclear compartment is demarked by DAPI staining (purple).

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00000104 Nucleus Breast cancer cell qRT-PCR|Chip-seq 21963238
RLID00000105 Nucleus Embryonic stem cell qRT-PCR|Microarray 22193719
RLID00000106 Nucleus Breast cancer cell In situ hybridization 23133536
RLID00000107 Cytoplasm Breast cancer cell In situ hybridization 23133536