Detail

RLID: RLID00001007
RNA Symbol: Airn
RNA Category: lncRNA
Organism: Mus musculus
Aliase: 2810051F02Rik, 2810434M15Rik, AI256653, AI597500, AW049873, Air, B930018I07Rik, D17Ertd663e, IGF2RAS
Sequence:
Subcellular Localization:
Localization Tissue Validated Method PMID
Nucleus Fibroblast qRT-PCR|Northern blot 16874305
Description: We show that Air is transcribed from a DNA methylation-sensitive promoter by RNA polymerase II (RNAPII). However, although it is capped and polyadenylated similar to other RNAPII transcripts, the majority of Air transcripts evade cotranscriptional splicing resulting in a mature 108 kb ncRNA. As a consequence, the mature unspliced Air is nuclear localized and highly unstable.

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00001006 Cytoplasm Fibroblast qRT-PCR|Northern blot 16874305
RLID00001008 Nucleus Placenta In situ hybridization 18988810
RLID00001009 Nucleus Placenta In situ hybridization 23239737
RLID00001010 Nucleus Spleen Next-generation sequencing|qRT-PCR 23209567
RLID00001011 Nucleus Neuroblastoma cell Microarray 22406755