Detail
| RLID: | RLID00003622 |
| RNA Symbol: | Gapdh |
| RNA Category: | mRNA |
| Organism: | Mus musculus |
| Aliase: | Gapd |
| Homology: | GAPDH (Homo sapiens), Gapdh (Rattus norvegicus ) |
| Subcellular Localization: | |
| Localization | Tissue | Validated Method | PMID |
| Nucleus | 293T cell | qRT-PCR | 23898399 |
| Description: Gapdh was tested as a control and found to be evenly distributed between the nucleus and cytoplasm with little transcript found on the chromatin. Likewise, Cox2 Divergent, Gp96 Convergent, and H2-T23/24AS were evenly distributed between nucleus and cytoplasm. HoxA11AS was mostly nuclear with some transcript found in the cytoplasm, but not on the chromatin. Interestingly, Lethe, Pbrm1 Convergent, Scripture 16,612 and Scripture 60,588 were found mostly on the chromatin, with a smaller fraction in the nucleus. | |||
Other Subcellular Localization:
| RLID | Localization | Tissue | Validated Method | PMID |
| RLID00003615 | Cytoplasm | Fibroblast | qRT-PCR|Northern blot | 16874305 |
| RLID00003616 | Exosome | Mast cell | Microarray | 17486113 |
| RLID00003617 | Ribosome | B cell | Northern blot | 12923260 |
| RLID00003618 | Ribosome | B cell | S1 nuclease protection assays | 12923260 |
| RLID00003619 | Cytosol | Macrophage | qRT-PCR | 26179904 |
| RLID00003620 | Axon | Motoneuron | In situ hybridization|qRT-PCR | 26464439 |
| RLID00003621 | Somatodendritic compartment | Motoneuron | In situ hybridization|qRT-PCR | 26464439 |
| RLID00003623 | Cytoplasm | 293T cell | qRT-PCR | 23898399 |
| RLID00003624 | Ribosome | J558 cell | Northern blot | 12923260 |