Detail

RLID: RLID00004662
RNA Symbol: Map1b
RNA Category: mRNA
Organism: Mus musculus
Aliase: A230055D22, AI843217, LC1, MAP5, Mtap-5, Mtap1b, Mtap5
Sequence:
Homology: MAP1B (Homo sapiens )
Network:
Subcellular Localization:
Localization Tissue Validated Method PMID
Dendrite Neuron Fluorescence in situ hybridization 18539120
Description: Fig. 1 Fluorescence in situ hybridization (FISH) of hippocampal neurons. (a-d) Neurons from wild-type (WT, right panels) or FMRP-knockout (KO, left panels) were cultured for 10 days and either not stimulated ('unstim', upper panels') or stimulated with 50uM DHPG for 15 minutes ('DHPG' lower panels). Corresponding histograms showing dendritic quantification of FISH experiments are shown to the right. Results for WT (black bars) and KO (white bars) are labeled on the x-axis. Close-up images of dendritic signals are shown to the right (in same order). (a) MAP1b mRNA (n=15-16; *p<0.001 for unstimulated vs. DHPG in WT, P>0.25 for KO). (b)CaMKIIa mRNA (n=15-17; *p<0.01 for WT, p>0.2 for KO). There was no significant difference in CaMKIIa abundance of unstimulated neurons between WT and KO (n=15, p>0.1). (c) Beta-actin mRNA (n=11-13; p>0.2). Scale bars=12um. (d-e) FISH for other mRNA targets of FMRP in both WT (right image panels) and KO (left image panels). Representative images shown for unstimulated (upper panels; 'unstim' and stimulated (lower panels; DHPG, 50uM), and close-up images of dendrites are displayed above the histograms (in same order). Histograms (right) showing dendritic fluorescence quantification are shown for WT (green) and KO (red) using probes to (d) SAPAP4 (n=16-17; p<0.01 for WT, p>25 for KO) and (e) GABA-A receptor delta (n=13-15; *, ***p<0.01 for unstimulated vs. DHPG in WT and for DHPG in WT and KO, **p<0.05 for unstimulated vs. DHPG in KO). (c) Dendritic CaMKIIa mRNA localization in response to DHPG (11DIV). (d) Dendritic SAPAP4 mRNA localization in response to DHPG (11DIV).

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00004659 Nucleus Neuroblastoma cell Microarray 22406755
RLID00004660 Nucleus Neuroblastoma cell Microarray 22406755
RLID00004661 Growth cone Hippocampus Fluorescence in situ hybridization 16631377
RLID00004663 Synapse Brain qRT-PCR 18539120
RLID00004664 Synapse Hippocampus In situ hybridization|Immunofluorescence assay 16098134
RLID00004665 Dendrite Hippocampus In situ hybridization|Immunofluorescence assay 16098134