Detail

RLID: RLID00005117
RNA Symbol: EGFR
RNA Category: mRNA
Organism: Homo sapiens
Aliase: ERBB, ERBB1, HER1, NISBD2, PIG61, mENA
Sequence:
Homology: Egfr (Mus musculus )
Network:
Subcellular Localization:
Localization Tissue Validated Method PMID
Nucleus Colon cancer cell Next-generation sequencing 24393600
Description: The RNA composition of the subcellular fractions differs significantly from each other, but lncRNAs are found in all locations. A subset of specific lncRNAs is enriched in the nucleus but surprisingly the majority is enriched in the cytosol and in ribosomal fractions. The ribosomal enriched lncRNAs include H19 and TUG1. Most studies on lncRNAs have focused on the regulatory function of these transcripts in the nucleus. We demonstrate that only a minority of all lncRNAs are nuclear enriched. Our findings suggest that many lncRNAs may have a function in cytoplasmic processes, and in particular in ribosome complexes. Data were collected from additional file 5: Table showing the normalized read counts for each cluster in Figure 4A.

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00005118 Cytoplasm Breast cell cancer In situ hybridization 1983869
RLID00005119 Endoplasmic reticulum NCI/ADR-RES cell qRT-PCR 20453113
RLID00005120 Nucleus Breast cell cancer In situ hybridization 1983869