Detail
| RLID: | RLID00005832 |
| RNA Symbol: | Xist |
| RNA Category: | lncRNA |
| Organism: | Mus musculus |
| Aliase: | A430022B11, AI314753 |
| Subcellular Localization: | |
| Localization | Tissue | Validated Method | PMID |
| Nucleus | Neuroblastoma cell | Microarray | 22406755 |
| Description: Array analysis revealed 499 lncRNAs that were significantly enriched in the cytoplasm and 191 in the nucleus. Intersection with lincRNAs and lncRNAs listed in lncRNAdb revealed a number of known and uncharacterized localizations of lncRNAs, including nuclear enrichment of Adapt33, Zfas1, and several other snoRNA host genes. Taken together, these results support the widespread trafficking of lncRNAs to different subcellular locations. All normalized stability and localization array data is available in Supplemental S2. | |||
Other Subcellular Localization:
| RLID | Localization | Tissue | Validated Method | PMID |
| RLID00005822 | Nucleoplasm | Fibroblast | In situ hybridization | 20833368 |
| RLID00005823 | Nucleus | Embryo cell | qRT-PCR | 11891913 |
| RLID00005824 | Nucleus | Embryonic stem cell | In situ hybridization|RT-PCR | 12900552 |
| RLID00005825 | Nucleus | Oocyte | In situ hybridization | 16007070 |
| RLID00005826 | Nucleus | - | lncRNAdb | 25332394 |
| RLID00005827 | Nucleus | Stem cell | qRT-PCR | 18625719 |
| RLID00005828 | Nucleus | Embryonic stem cell | Fluorescence in situ hybridization | 24462204 |
| RLID00005829 | Nucleus | Embryonic stem cell | In situ hybridization | 9069284 |
| RLID00005830 | Nucleus | Embryonic stem cell | qRT-PCR | 9660859 |
| RLID00005831 | Nucleus | Bone marrow Macrophage | Next-generation sequencing | 22817891 |
| RLID00005833 | Nucleus | Embryotem cell | Microscopy | 26190105 |
| RLID00005834 | Axon | Motoneuron | In situ hybridization|qRT-PCR | 26464439 |