Detail
| RLID: | RLID00008371 |
| RNA Symbol: | GAPDH |
| RNA Category: | mRNA |
| Organism: | Homo sapiens |
| Aliase: | G3PD, GAPD, HEL-S-162eP |
| Homology: | Gapdh (Mus musculus), Gapdh (Rattus norvegicus ) |
| Subcellular Localization: | |
| Localization | Tissue | Validated Method | PMID |
| Endoplasmic reticulum | HEK293|HeLa|HDF|J558 cell | qRT-PCR | 25142066 |
| Description: Figure 3: Correlation between paired measurements of the fraction of 18S rRNA and GAPDH mRNA on the ER membrane. Correlation between paired measurements of the fraction of 18S rRNA and GAPDH mRNA on the ER membrane. (A) Ribosome and GAPDH mRNA distributions were determined in the indicated cell lines and in 16 independent experiments conducted with HEK293 cells (B). qPCR array data comparing RNA distribution in cytosol and membrane fractions of HEK293 (C) and J558 (D) cells. Data are represented as a histogram of the fractional value of RNA in the membrane fraction for various cohorts of RNAs. mRNAcyt represent RNAs that encode cytosolic and nucleoplasmic proteins; mRNAsec include RNAs encoding secretory and membrane proteins as well as resident proteins of endomembrane organelles. (?) Mean, (蟽) deviation. Data are collected from Figure 3. | |||
Other Subcellular Localization:
| RLID | Localization | Tissue | Validated Method | PMID |
| RLID00008363 | Ribosome | Jurkat cell | Northern blot | 12923260 |
| RLID00008364 | Ribosome | T-cell|SeAx | qRT-PCR | 19175411 |
| RLID00008365 | Ribosome | Colon cancer cell | Next-generation sequencing | 24393600 |
| RLID00008366 | Exosome | Colon|Liver|Lung | qRT-PCR | 22895844 |
| RLID00008367 | Ribosome | T-cell line Jurkat | Northern blot | 12923260 |
| RLID00008368 | Ribosome | T-cell line Jurkat | S1 nuclease protection assays | 12923260 |
| RLID00008369 | Mitochondrion | HDF cell | Fluorescence in situ hybridization | 16178658 |
| RLID00008370 | Cytosol | HEK293 cell | Northern blot | 21431749 |
| RLID00008372 | Cytosol | HeLa cell|HEK293 cell | In situ hybridization | 25142066 |
| RLID00008373 | Ribosome | HEK293|HeLa|HDF|J558 cell | qRT-PCR | 25142066 |
| RLID00008374 | Endoplasmic reticulum | U2OS cell | Fluorescence in situ hybridization | 26272916 |
| RLID00008375 | Ribosome | HEK293 cell | Next-generation sequencing | 22199352 |
| RLID00008376 | Nucleus | Nasopharyngeal carcinoma cell | Next-generation sequencing | 20498841 |
| RLID00008377 | Cytoplasm | Nasopharyngeal carcinoma cell | Next-generation sequencing | 20498841 |
| RLID00008378 | Cytoplasm | Embryonic stem cell | qRT-PCR|Microarray | 22193719 |
| RLID00008379 | Cytosol | HT1080 cell | Fluorescence in situ hybridization|qRT-PCR | 25753659 |