Detail
| RLID: | RLID00018176 |
| RNA Symbol: | ACTB |
| RNA Category: | mRNA |
| Organism: | Homo sapiens |
| Aliase: | BRWS1, PS1TP5BP1 |
| Homology: | ACTB (Gallus gallus), Actb (Mus musculus) |
| Subcellular Localization: | |
| Localization | Tissue | Validated Method | PMID |
| Ribosome | HEK293 cell | Next-generation sequencing | 22199352 |
| Description: Reads from mRNA and ribosome footprinting libraries were then remapped to this subset of mRNAs, allowing each read to map to two locations, allowing two mismatches in a 25-nt seed region, and enabling the best and strata options. Mapping details are provided in supplemental Table S1 with abundance and ribosome loading of each mRNA specified in supplemental Table S2. Data are collected from Table S2. | |||
Other Subcellular Localization:
| RLID | Localization | Tissue | Validated Method | PMID |
| RLID00018166 | Ribosome | Colon cancer cell | Next-generation sequencing | 24393600 |
| RLID00018167 | Exosome | Colon|Liver|Lung | qRT-PCR | 22895844 |
| RLID00018168 | Cell leading edge | Jurkat cell | In situ hybridization | 12923260 |
| RLID00018169 | Nucleus | HeLa cell | In situ hybridization | 15081402 |
| RLID00018170 | Cell leading edge | SW480 CRC cell | Fluorescence in situ hybridization|qRT-PCR | 18535985 |
| RLID00018171 | Cytosol | NCI/ADR-RES cell | qRT-PCR | 20453113 |
| RLID00018172 | Lamellipodium | Lung fibroblast | Fluorescence in situ hybridization | 23452202 |
| RLID00018173 | Cell leading edge | Lung fibroblast | qRT-PCR | 23452202 |
| RLID00018174 | Mitochondrion | HeLa cell | Sticky-Flare Synthesis | 26195734 |
| RLID00018175 | Ribosome | Kidney | RT-PCR | 26239904 |
| RLID00018177 | Nucleus | Nasopharyngeal carcinoma cell | Next-generation sequencing | 20498841 |
| RLID00018178 | Cytoplasm | Nasopharyngeal carcinoma cell | Next-generation sequencing | 20498841 |
| RLID00018179 | Cytoplasm | Embryonic stem cell | qRT-PCR|Microarray | 22193719 |
| RLID00018180 | Cytoplasm | U2OS cell | RT-PCR | 22679391 |
| RLID00018181 | Cytosol | HT1080 cell | Fluorescence in situ hybridization|qRT-PCR | 25753659 |
| RLID00018182 | Ribosome | HT1080 cell | qRT-PCR | 25753659 |
| RLID00018183 | Ribosome | Lung fibroblast | qRT-PCR | 23452202 |