Detail

RLID: RLID00019768
RNA Symbol: SSR1
RNA Category: mRNA
Organism: Homo sapiens
Aliase: TRAPA
Sequence:
Homology: Ssr1 (Mus musculus )
Subcellular Localization:
Localization Tissue Validated Method PMID
Ribosome HEK293 cell Next-generation sequencing 22199352
Description: Reads from mRNA and ribosome footprinting libraries were then remapped to this subset of mRNAs, allowing each read to map to two locations, allowing two mismatches in a 25-nt seed region, and enabling the best and strata options. Mapping details are provided in supplemental Table S1 with abundance and ribosome loading of each mRNA specified in supplemental Table S2. Data are collected from Table S2.

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00019767 Ribosome Colon cancer cell Next-generation sequencing 24393600
RLID00019769 Nucleus Nasopharyngeal carcinoma cell Next-generation sequencing 20498841
RLID00019770 Cytoplasm Nasopharyngeal carcinoma cell Next-generation sequencing 20498841
RLID00019771 Endoplasmic reticulum U2OS cell RT-PCR 22679391
RLID00019772 Endoplasmic reticulum Myeloma cell qRT-PCR 21613539