Detail
| RLID: | RLID00023022 |
| RNA Symbol: | CALR |
| RNA Category: | mRNA |
| Organism: | Homo sapiens |
| Aliase: | CRT, HEL-S-99n, RO, SSA, cC1qR |
| Homology: | Calr (Mus musculus), Calr (Rattus norvegicus ) |
| Subcellular Localization: | |
| Localization | Tissue | Validated Method | PMID |
| Ribosome | HEK293 cell | Next-generation sequencing | 22199352 |
| Description: Reads from mRNA and ribosome footprinting libraries were then remapped to this subset of mRNAs, allowing each read to map to two locations, allowing two mismatches in a 25-nt seed region, and enabling the best and strata options. Mapping details are provided in supplemental Table S1 with abundance and ribosome loading of each mRNA specified in supplemental Table S2. Data are collected from Table S2. | |||
Other Subcellular Localization:
| RLID | Localization | Tissue | Validated Method | PMID |
| RLID00023017 | Ribosome | Colon cancer cell | Next-generation sequencing | 24393600 |
| RLID00023018 | Endoplasmic reticulum | T-cell line Jurkat | S1 nuclease protection assays | 12923260 |
| RLID00023019 | Ribosome | T-cell line Jurkat | S1 nuclease protection assays | 12923260 |
| RLID00023020 | Endoplasmic reticulum | HEK293 cell | Northern blot | 21431749 |
| RLID00023021 | Ribosome | HeLa cell | qRT-PCR | 25063809 |
| RLID00023023 | Endoplasmic reticulum | COS-7 cell | Fluorescence in situ hybridization | 22679391 |
| RLID00023024 | Endoplasmic reticulum | U2OS cell | RT-PCR | 22679391 |
| RLID00023025 | Nucleus | COS-7 cell | Fluorescence in situ hybridization | 22679391 |
| RLID00023026 | Endoplasmic reticulum | Myeloma cell | qRT-PCR | 21613539 |
| RLID00023027 | Ribosome | Jurkat cell | Northern blot | 12923260 |