Detail
| RLID: | RLID00023026 |
| RNA Symbol: | CALR |
| RNA Category: | mRNA |
| Organism: | Homo sapiens |
| Aliase: | CRT, HEL-S-99n, RO, SSA, cC1qR |
| Homology: | Calr (Mus musculus), Calr (Rattus norvegicus ) |
| Subcellular Localization: | |
| Localization | Tissue | Validated Method | PMID |
| Endoplasmic reticulum | Myeloma cell | qRT-PCR | 21613539 |
| Description: The mRNA transcriptome is currently thought to be partitioned between the cytosol and endoplasmic reticulum (ER) compartments by binary selection; mRNAs encoding cytosolic/nucleoplasmic proteins are translated on free ribosomes, and mRNAs encoding topogenic signal-bearing proteins are translated on ER-bound ribosomes, with ER localization being conferred by the signal-recognition particle pathway. Data are collected from Supplemental Data - The gene lists selected by the described GO categories are listed. Gene ID and subcellular distribution values, in log2 as well as fractional ER enrichment are listed. | |||
Other Subcellular Localization:
| RLID | Localization | Tissue | Validated Method | PMID |
| RLID00023017 | Ribosome | Colon cancer cell | Next-generation sequencing | 24393600 |
| RLID00023018 | Endoplasmic reticulum | T-cell line Jurkat | S1 nuclease protection assays | 12923260 |
| RLID00023019 | Ribosome | T-cell line Jurkat | S1 nuclease protection assays | 12923260 |
| RLID00023020 | Endoplasmic reticulum | HEK293 cell | Northern blot | 21431749 |
| RLID00023021 | Ribosome | HeLa cell | qRT-PCR | 25063809 |
| RLID00023022 | Ribosome | HEK293 cell | Next-generation sequencing | 22199352 |
| RLID00023023 | Endoplasmic reticulum | COS-7 cell | Fluorescence in situ hybridization | 22679391 |
| RLID00023024 | Endoplasmic reticulum | U2OS cell | RT-PCR | 22679391 |
| RLID00023025 | Nucleus | COS-7 cell | Fluorescence in situ hybridization | 22679391 |
| RLID00023027 | Ribosome | Jurkat cell | Northern blot | 12923260 |