Detail
| RLID: | RLID00029378 |
| RNA Symbol: | hsa-miR-196a-5p |
| RNA Category: | miRNA |
| Organism: | Homo sapiens |
| Aliase: | hsa-miR-196a |
| Subcellular Localization: | |
| Localization | Tissue | Validated Method | PMID |
| Nucleus | HeLa cell | Next-generation sequencing | 22058130 |
| Description: Here, we present a data set excluding these RNA before sequencing through locked nucleic acids (LNA), greatly increasing pre-miRNA sequence counts with no discernable effect on pre-miRNA or mature miRNA sequencing. Analysis of profiles generated in total, nuclear and cytoplasmic cell fractions reveals that pre-miRNAs are subject to a wide range of regulatory processes involving loci-specific 3'- and 5'-end variation entailing complex cleavage patterns with co-occurring polyuridylation. Data were collected from Supplementary file. | |||
Other Subcellular Localization:
| RLID | Localization | Tissue | Validated Method | PMID |
| RLID00029369 | Circulating | Serum | qRT-PCR | 22798503 |
| RLID00029370 | Cytoplasm | Nasopharyngeal carcinoma cell | Next-generation sequencing | 20498841 |
| RLID00029371 | Exosome | T cell | Microarray | 21505438 |
| RLID00029372 | Exosome | Brain tissue | Microarray | 23382797 |
| RLID00029373 | Microvesicle | Hepatoma cell | qRT-PCR|Microarray | 23771658 |
| RLID00029374 | Mitochondrion | Skeletal muscular cell | In situ hybridization|qRT-PCR | 21637849 |
| RLID00029375 | Mitochondrion | HeLa cell | Next-generation sequencing | 22984580 |
| RLID00029376 | Mitochondrion | Eembryonic kidney cell | Next-generation sequencing | 22984580 |
| RLID00029377 | Nucleus | Nasopharyngeal carcinoma cell | Next-generation sequencing | 20498841 |
| RLID00029379 | Cytoplasm | HeLa|MCF7 | Microarray | 24918059 |
| RLID00029380 | Nucleus | HeLa|MCF7 | Microarray | 24918059 |
| RLID00029381 | Microvesicle | A549|HepG2 | Microarrays|RT-PCR | 20615901 |
| RLID00029382 | Exosome | A549|HepG2 | Microarrays|RT-PCR | 20615901 |