Detail

RLID: RLID00029381
RNA Symbol: hsa-miR-196a-5p
RNA Category: miRNA
Organism: Homo sapiens
Aliase: hsa-miR-196a
Sequence:
Homology: hsa-miR-196a-3p (Homo sapiens), hsa-miR-196b-3p (Homo sapiens)
Network:
Subcellular Localization:
Localization Tissue Validated Method PMID
Microvesicle A549|HepG2 Microarrays|RT-PCR 20615901
Description: These observations of miRNA distribution demonstrate that the miRNA export system in the cells must somehow be able to target specific miRNAs to specific extracellular structures, but does not exclusively channel specific miRNAs to a given fraction. There are, however, some miRNAs that are found in the supernatant almost to the exclusion of all other fractions (miR-219 in A549 culture medium, Figure 4b, for example). Another significant observation from this data is that even though we showed that the two cell lines studied here export a similar spectrum of miRNAs (Figure 1b) the distributions of miRNAs from the two cell lines demonstrate clear differences, as shown in Figure 4b and c. For example, miR-145 is present at very low levels in HepG2 derived microvesicles (Figure 4c), while the same miRNA is present at significant levels in both A549 derived microvesicles and exosomes (Figure 4b). On the other hand, there are some miRNAs, notably those that are almost uniformly distributed among the fractions, with the same distribution no matter which cell-line is the source. These observations certainly indicate the degree of complexity of this export system that will bear further investigation. Data are collected from Figure 4.

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00029369 Circulating Serum qRT-PCR 22798503
RLID00029370 Cytoplasm Nasopharyngeal carcinoma cell Next-generation sequencing 20498841
RLID00029371 Exosome T cell Microarray 21505438
RLID00029372 Exosome Brain tissue Microarray 23382797
RLID00029373 Microvesicle Hepatoma cell qRT-PCR|Microarray 23771658
RLID00029374 Mitochondrion Skeletal muscular cell In situ hybridization|qRT-PCR 21637849
RLID00029375 Mitochondrion HeLa cell Next-generation sequencing 22984580
RLID00029376 Mitochondrion Eembryonic kidney cell Next-generation sequencing 22984580
RLID00029377 Nucleus Nasopharyngeal carcinoma cell Next-generation sequencing 20498841
RLID00029378 Nucleus HeLa cell Next-generation sequencing 22058130
RLID00029379 Cytoplasm HeLa|MCF7 Microarray 24918059
RLID00029380 Nucleus HeLa|MCF7 Microarray 24918059
RLID00029382 Exosome A549|HepG2 Microarrays|RT-PCR 20615901