Detail

RLID: RLID00032074
RNA Symbol: hsa-miR-338-3p
RNA Category: miRNA
Organism: Homo sapiens
Aliase: hsa-miR-338
Sequence:
Homology: hsa-miR-338-5p (Homo sapiens), mmu-miR-338-3p (Mus musculus)
Network:
Subcellular Localization:
Localization Tissue Validated Method PMID
Nucleus HeLa cell Next-generation sequencing 22058130
Description: Here, we present a data set excluding these RNA before sequencing through locked nucleic acids (LNA), greatly increasing pre-miRNA sequence counts with no discernable effect on pre-miRNA or mature miRNA sequencing. Analysis of profiles generated in total, nuclear and cytoplasmic cell fractions reveals that pre-miRNAs are subject to a wide range of regulatory processes involving loci-specific 3'- and 5'-end variation entailing complex cleavage patterns with co-occurring polyuridylation. Data were collected from Supplementary file.

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00032069 Circulating Cerebrospinal fluid Next-generation sequencing|RT-PCR 23525801
RLID00032070 Cytoplasm Nasopharyngeal carcinoma cell Next-generation sequencing 20498841
RLID00032071 Exosome Dendritic cell Microarray 21505438
RLID00032072 Exosome Brain tissue Microarray 23382797
RLID00032073 Nucleus Nasopharyngeal carcinoma cell Next-generation sequencing 20498841
RLID00032075 Cytoplasm HeLa|MCF7 Microarray 24918059
RLID00032076 Nucleus HeLa|MCF7 Microarray 24918059
RLID00032077 Microvesicle Serum RNA-seq|miRDeep3 24797360
RLID00032078 Exosome Mast cell Microarray 24009880