Detail

RLID: RLID00037038
RNA Symbol: Xlsirt
RNA Category: lncRNA
Organism: Xenopus laevis
Subcellular Localization:
Localization Tissue Validated Method PMID
Mitochondrion Oocyte In situ hybridization 9545550
Description: To help distinguish between these alternatives, we made several constructs in which we linked the Xlsirts localization signals to various regions of the full-length Vg1 mRNA (Fig. 1) and tested the ability of the chimeric RNAs to move to the mitochondrial cloud in stage 1 oocytes. Fig. 2. Localization of endogenous and exogenous Xlsirts and Vg1 RNAs in oocytes. (A) Whole-mount in situ hybridization with Xlsirt RNA probe in late stage 1 oocytes. The arrow points to the endogenous Xlsirt RNA localized in the METRO region of the mitochondrial cloud. (C) Whole mount in situ hybridization with Vg1 RNA probe in late stage 1 oocytes, Vg1 RNA is dispersed in the oocyte cytoplasm and is excluded from the mitochondrial cloud (arrow). (D) Injected Vg1 RNA spreads throughout the cytoplasm and is excluded from the mitochondrial cloud in late stage 1 oocytes (arrow). (E) Stage 1 oocytes injected with Vg-Xlsirt chimeric RNA showing localization in the METRO region of the mitochondrial cloud (arrows).

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00037032 Mitochondrion Oocyte - 7505061
RLID00037033 Vegetal Oocyte - 7505061
RLID00037034 Mitochondrion Oocyte In situ hybridization 7539356
RLID00037035 Cytoplasm Oocyte In situ hybridization 8948579
RLID00037036 Mitochondrion Oocyte In situ hybridization 8948579
RLID00037037 Vegetal Oocyte In situ hybridization 8948579
RLID00037039 Endoplasmic reticulum Oocyte In situ hybridization 9545550
RLID00037040 Vegetal Oocyte In situ hybridization 9545550
RLID00037041 Vegetal Oocyte In situ hybridization 9739112
RLID00037042 Mitochondrion Oocyte In situ hybridization 9739112
RLID00037043 Germ plasm Oocyte In situ hybridization 9739112
RLID00037044 Germ plasm Oocyte In situ hybridization 11784096
RLID00037045 Mitochondrion Oocyte In situ hybridization 11784096
RLID00037046 Vegetal Oocyte In situ hybridization 12676327
RLID00037047 Mitochondrion Oocyte Quantitative RNA localization assay 19223445