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| EWAS ID | KEGG ID | Class | Disease/Phenotype [sample size n] |
Sample groups (case/control, trait, cell type etc.) |
KEGG Pathway Name | Pathway Gene Number | Gene Number Annotated In The KEGG Pathway | Pvalue | |
| Group1 [sample size n] |
Group2 [sample size n] |
||||||||
| EWAS71 | hsa04530 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
Tight junction | 137 | 126 | 1.88e-006 |
| EWAS71 | hsa04540 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
Gap junction | 88 | 81 | 8.03e-005 |
| EWAS71 | hsa04550 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
Signaling pathways regulating pluripotency of stem cells | 140 | 129 | 1.08e-006 |
| EWAS71 | hsa04611 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
Platelet activation | 129 | 126 | 3.97e-012 |
| EWAS71 | hsa04640 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
Hematopoietic cell lineage | 81 | 76 | 1.6e-005 |
| EWAS71 | hsa04660 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
T cell receptor signaling pathway | 104 | 98 | 7.29e-007 |
| EWAS71 | hsa04662 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
B cell receptor signaling pathway | 72 | 67 | 0.0001 |
| EWAS71 | hsa04664 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
Fc epsilon RI signaling pathway | 67 | 62 | 0.000271 |
| EWAS71 | hsa04666 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
Fc gamma R-mediated phagocytosis | 92 | 85 | 3.76e-005 |
| EWAS71 | hsa04668 | disease | head and neck squamous cell cancer (HNSCC) [n=24] |
human neck squamous cell carcinoma (HNSCC)? [n=12] |
Normal [n=12] |
TNF signaling pathway | 107 | 99 | 8.77e-006 |