All polymorphisms studied in this paper [PMID: 10852383] , total : 54 polymorphisms

Title : Different gene loci within the HLA-DR and TNF regions are independently associated with susceptibility and severity in Spanish rheumatoid arthritis patients.
Abstract : The aim of this study was to investigate whether polymorphisms in the tumor necrosis factor (TNF) and HLA-DRB1 gene regions are independently associated with rheumatoid arthritis (RA) in a population from Lugo region of northwestern Spain. RA patients (n=179) attending hospital outpatient clinics in Lugo, northwestern Spain and matched controls (n=145) were recruited. RA susceptibility in this population was predominantly associated with DRB1*0401, while erosive disease was associated with HLA-DRB1*0101 and DRB1*04. The increase in DRB1*04 was accounted for by an increase in DRB1*0404 and *0405 but not *0401 frequencies. In contrast, *0401 frequency was significantly increased in seropositive patients. The rheumatoid arthritis shared epitope (SE) was associated with increased risk for seropositive and erosive disease and this appeared to operate in a dose-dependent manner. Logistic regression analyses revealed that the TNF microsatellite markers TNFc1 and b3 were associated with RA independently of DRB1*04 and the SE. Carriage of a TNF c1 allele provided an increased risk of RA in SE-negative and SE-heterozygous individuals. TNFc1 and TNFb3 were not associated with erosive or seropositive disease. In contrast, TNF a2 was significantly associated with erosive disease which was independent of DRB1*04 and the SE. Further studies will be needed to establish why (TNFc1) polymorphism seemingly associated with low TNFalpha production, is a risk factor for RA.
Author : Hajeer AH,Dababneh A,Makki RF,Thomson W,Poulton K,Gonzalez-Gay MA,Garcia-Porrua C,Mattey DL,Ollier WE,
Source : Tissue Antigens. 2000 Apr;55(4):319-25.
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No.Polymorphism nameGene SymbolEntrez Gene ID
31 NA TNF 7124
32 NA TNF 7124
33 NA TNF 7124
34 NA TNF 7124
35 NA TNF 7124
36 NA TNF 7124
37 NA TNF 7124
38 NA TNF 7124
39 NA TNF 7124
40 NA TNF 7124
41 NA TNF 7124
42 NA TNF 7124
43 NA TNF 7124
44 NA TNF 7124
45 NA TNF 7124
46 NA TNF 7124
47 NA TNF 7124
48 NA TNF 7124
49 NA TNF 7124
50 NA TNF 7124
51 NA TNF 7124
52 NA TNF 7124
53 NA TNF 7124
54 NA TNF 7124
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