All polymorphisms studied in this paper [PMID: 17932559] , total : 52 polymorphisms

Title : Association of STAT4 with rheumatoid arthritis in the Korean population.
Abstract : A recent study in the North American White population has documented the association of a common STAT4 haplotype (tagged by rs7574865) with risk for rheumatoid arthritis (RA) and systemic lupus erythematosus. To replicate this finding in the Korean population, we performed a case-control association study. We genotyped 67 single nucleotide polymorphisms (SNPs) within the STAT1 and STAT4 regions in 1123 Korean patients with RA and 1008 ethnicity-matched controls. The most significant four risk SNPs (rs11889341, rs7574865, rs8179673, and rs10181656 located within the third intron of STAT4) among 67 SNPs are identical with those in the North American study. All four SNPs have modest risk for RA susceptibility (odds ratio 1.21-1.27). A common haplotype defined by these markers (TTCG) carries significant risk for RA in Koreans [34 percent versus 28 percent, P=0.0027, OR (95 percent CI)=1.33 (1.10-1.60)]. By logistic regression analysis, this haplotype is an independent risk factor in addition to the classical shared epitope alleles at the HLA-DRB1 locus. There were no significant associations with age of disease onset, radiographic progression, or serologic status using either allelic or haplotypic analysis. Unlike several other risk genes for RA such as PTPN22, PADI4, and FCRL3, a haplotype of the STAT4 gene shows consistent association with RA susceptibility across Whites and Asians, suggesting that this risk haplotype predates the divergence of the major racial groups.
Author : Lee HS,Remmers EF,Le JM,Kastner DL,Bae SC,Gregersen PK,
Source : Mol Med. 2007 Sep-Oct;13(9-10):455-60.
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No.Polymorphism nameGene SymbolEntrez Gene ID
31 rs2356350 STAT4 6775
32 rs11685878 STAT4 6775
33 rs4853546 STAT4 6775
34 rs1031509 STAT4 6775
35 rs12327969 STAT4 6775
36 rs10497711 STAT4 6775
37 rs7572482 STAT4 6775
38 rs2278940 STAT4 6775
39 rs897200 STAT4 6775
40 rs16833437 STAT4 6775
41 rs1031507 STAT4 6775
42 rs13001658 STAT4 6775
43 rs1869624 STAT4 6775
44 rs4853550 STAT4 6775
45 rs4853551 STAT4 6775
46 rs12467660 STAT4 6775
47 rs2054090 STAT4 6775
48 rs7595886 STAT4 6775
49 rs11889341 STAT4 6775
50 rs7574865 STAT4 6775
51 rs8179673 STAT4 6775
52 rs10181656 STAT4 6775
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