All polymorphisms studied in this paper [PMID: 19262425] , total : 71 polymorphisms

Title : Investigation of genetic variants within candidate genes of the TNFRSF1B signalling pathway on the response to anti-TNF agents in a UK cohort of rheumatoid arthritis patients.
Abstract : The introduction of anti-tumour necrosis factor (TNF) agents has greatly improved the treatment of rheumatoid arthritis; however, a significant proportion of patients fail to respond to therapy. We hypothesized that genes within the TNF receptor superfamily member 1B signalling pathway contribute towards the observed variation in patient response. This was tested by genotyping 73 single-nucleotide polymorphisms (SNPs) from six candidate genes (DUSP1, HRB, IKBKAP, MAP3K1, MAP3K14 and TANK) in a large UK cohort of rheumatoid arthritis patients (n=642). Two SNPs [rs96844 (MAP3K1) and rs4792847 (MAP3K14)] showed evidence of association (P<0.05) to treatment response and were subsequently examined in an independent cohort of patients (n=428). Replication of association to either SNP was not achieved, but combined analysis of the complete cohort (n=1070) provided nominal evidence of association to both SNPs. We conclude that analysis of the common variation in the selected candidate genes did not provide strong evidence to implicate their involvement in varying patient response to anti-TNF treatment.
Author : Bowes JD,Potter C,Gibbons LJ,Hyrich K,Plant D,Morgan AW,Wilson AG,Isaacs JD,Worthington J,Barton A,
Source : Pharmacogenet Genomics. 2009 Apr;19(4):319-23. doi: 10.1097/FPC.0b013e328328d51f.
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No.Polymorphism nameGene SymbolEntrez Gene ID
61 rs2867316 MAP3K14 9020
62 rs3744410 MAP3K14 9020
63 rs4328483 NA NA
64 rs4792849 MAP3K14 9020
65 rs11884495 TANK 10010
66 rs1267033 TANK 10010
67 rs1267034 TANK 10010
68 rs1267068 TANK 10010
69 rs1559526 TANK 10010
70 rs4664406 NA NA
71 rs7568498 TANK 10010
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