All polymorphisms studied in this paper [PMID: 20220768] , total : 255 polymorphisms

Title : A candidate gene study of CLEC16A does not provide evidence of association with risk for anti-CCP-positive rheumatoid arthritis.
Abstract : CLEC16A, a putative immunoreceptor, was recently established as a susceptibility locus for type I diabetes and multiple sclerosis. Subsequently, associations between CLEC16A and rheumatoid arthritis (RA), Addison's disease and Crohn's disease have been reported. A large comprehensive and independent investigation of CLEC16A variation in RA was pursued. This study tested 251 CLEC16A single-nucleotide polymorphisms in 2542 RA cases (85% anti-cyclic citrullinated peptide (anti-CCP) positive) and 2210 controls (N=4752). All individuals were of European ancestry, as determined by ancestry informative genetic markers. No evidence for significant association between CLEC16A variation and RA was observed. This is the first study to fully characterize common genetic variation in CLEC16A including assessment of haplotypes and gender-specific effects. The previously reported association between RA and rs6498169 was not replicated. Results show that CLEC16A does not have a prominent function in susceptibility to anti-CCP-positive RA.
Author : Bronson PG,Ramsay PP,Seldin MF,Gregersen PK,Criswell LA,Barcellos LF,
Source : Genes Immun. 2010 Sep;11(6):504-8. doi: 10.1038/gene.2010.7. Epub 2010 Mar 11.
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No.Polymorphism nameGene SymbolEntrez Gene ID
1 rs3743976 CLEC16A 23274
2 rs16957801 CLEC16A 23274
3 rs12598008 CLEC16A 23274
4 rs12922318 CLEC16A 23274
5 rs16957807 CLEC16A 23274
6 rs8051196 CLEC16A 23274
7 rs8051340 CLEC16A 23274
8 rs12931878 CLEC16A 23274
9 rs8055533 CLEC16A 23274
10 rs8055876 CLEC16A 23274
11 rs6498137 CLEC16A 23274
12 rs3813754 CLEC16A 23274
13 rs6498138 CLEC16A 23274
14 rs10492842 CLEC16A 23274
15 rs8055123 CLEC16A 23274
16 rs8057540 CLEC16A 23274
17 rs8059156 CLEC16A 23274
18 rs12443971 CLEC16A 23274
19 rs6498139 CLEC16A 23274
20 rs7185978 CLEC16A 23274
21 rs1035089 CLEC16A 23274
22 rs1035088 CLEC16A 23274
23 rs7186264 CLEC16A 23274
24 rs7192171 CLEC16A 23274
25 rs16957835 CLEC16A 23274
26 rs4781027 CLEC16A 23274
27 rs7404554 CLEC16A 23274
28 rs16957836 CLEC16A 23274
29 rs16957839 CLEC16A 23274
30 rs1700820 CLEC16A 23274
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