All polymorphisms studied in this paper [PMID: 20220768] , total : 255 polymorphisms

Title : A candidate gene study of CLEC16A does not provide evidence of association with risk for anti-CCP-positive rheumatoid arthritis.
Abstract : CLEC16A, a putative immunoreceptor, was recently established as a susceptibility locus for type I diabetes and multiple sclerosis. Subsequently, associations between CLEC16A and rheumatoid arthritis (RA), Addison's disease and Crohn's disease have been reported. A large comprehensive and independent investigation of CLEC16A variation in RA was pursued. This study tested 251 CLEC16A single-nucleotide polymorphisms in 2542 RA cases (85% anti-cyclic citrullinated peptide (anti-CCP) positive) and 2210 controls (N=4752). All individuals were of European ancestry, as determined by ancestry informative genetic markers. No evidence for significant association between CLEC16A variation and RA was observed. This is the first study to fully characterize common genetic variation in CLEC16A including assessment of haplotypes and gender-specific effects. The previously reported association between RA and rs6498169 was not replicated. Results show that CLEC16A does not have a prominent function in susceptibility to anti-CCP-positive RA.
Author : Bronson PG,Ramsay PP,Seldin MF,Gregersen PK,Criswell LA,Barcellos LF,
Source : Genes Immun. 2010 Sep;11(6):504-8. doi: 10.1038/gene.2010.7. Epub 2010 Mar 11.
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No.Polymorphism nameGene SymbolEntrez Gene ID
91 rs7203687 CLEC16A 23274
92 rs9935174 CLEC16A 23274
93 rs6498148 CLEC16A 23274
94 rs2286975 CLEC16A 23274
95 rs1003603 CLEC16A 23274
96 rs1985372 CLEC16A 23274
97 rs1861548 CLEC16A 23274
98 rs8045749 CLEC16A 23274
99 rs7194545 CLEC16A 23274
100 rs17804800 CLEC16A 23274
101 rs11074946 CLEC16A 23274
102 rs7196077 CLEC16A 23274
103 rs11860777 CLEC16A 23274
104 rs9923455 CLEC16A 23274
105 rs16957957 CLEC16A 23274
106 rs9932114 CLEC16A 23274
107 rs7185202 CLEC16A 23274
108 rs8052325 CLEC16A 23274
109 rs8056098 CLEC16A 23274
110 rs9940096 CLEC16A 23274
111 rs16957966 CLEC16A 23274
112 rs11859648 CLEC16A 23274
113 rs16957976 CLEC16A 23274
114 rs11865480 CLEC16A 23274
115 rs17230818 CLEC16A 23274
116 rs3901386 CLEC16A 23274
117 rs876457 CLEC16A 23274
118 rs9302458 CLEC16A 23274
119 rs16957984 CLEC16A 23274
120 rs741177 CLEC16A 23274
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