All polymorphisms studied in this paper [PMID: 20220768] , total : 255 polymorphisms

Title : A candidate gene study of CLEC16A does not provide evidence of association with risk for anti-CCP-positive rheumatoid arthritis.
Abstract : CLEC16A, a putative immunoreceptor, was recently established as a susceptibility locus for type I diabetes and multiple sclerosis. Subsequently, associations between CLEC16A and rheumatoid arthritis (RA), Addison's disease and Crohn's disease have been reported. A large comprehensive and independent investigation of CLEC16A variation in RA was pursued. This study tested 251 CLEC16A single-nucleotide polymorphisms in 2542 RA cases (85% anti-cyclic citrullinated peptide (anti-CCP) positive) and 2210 controls (N=4752). All individuals were of European ancestry, as determined by ancestry informative genetic markers. No evidence for significant association between CLEC16A variation and RA was observed. This is the first study to fully characterize common genetic variation in CLEC16A including assessment of haplotypes and gender-specific effects. The previously reported association between RA and rs6498169 was not replicated. Results show that CLEC16A does not have a prominent function in susceptibility to anti-CCP-positive RA.
Author : Bronson PG,Ramsay PP,Seldin MF,Gregersen PK,Criswell LA,Barcellos LF,
Source : Genes Immun. 2010 Sep;11(6):504-8. doi: 10.1038/gene.2010.7. Epub 2010 Mar 11.
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No.Polymorphism nameGene SymbolEntrez Gene ID
121 rs9939298 CLEC16A 23274
122 rs741176 CLEC16A 23274
123 rs11863415 CLEC16A 23274
124 rs12102345 CLEC16A 23274
125 rs876476 CLEC16A 23274
126 rs2286973 CLEC16A 23274
127 rs2286972 CLEC16A 23274
128 rs2160042 CLEC16A 23274
129 rs887864 CLEC16A 23274
130 rs741175 CLEC16A 23274
131 rs741174 CLEC16A 23274
132 rs741173 CLEC16A 23274
133 rs8061043 CLEC16A 23274
134 rs8062923 CLEC16A 23274
135 rs4781035 CLEC16A 23274
136 rs7195452 CLEC16A 23274
137 rs7200940 CLEC16A 23274
138 rs11860603 CLEC16A 23274
139 rs11865121 CLEC16A 23274
140 rs7198621 CLEC16A 23274
141 rs725613 CLEC16A 23274
142 rs16958021 CLEC16A 23274
143 rs12444495 CLEC16A 23274
144 rs7184491 CLEC16A 23274
145 rs12925642 CLEC16A 23274
146 rs9652600 CLEC16A 23274
147 rs9652601 CLEC16A 23274
148 rs9652582 CLEC16A 23274
149 rs2041670 CLEC16A 23274
150 rs16958028 CLEC16A 23274
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