All polymorphisms studied in this paper [PMID: 17897462] , total : 49 polymorphisms

Title : A case-control study of rheumatoid arthritis identifies an associated single nucleotide polymorphism in the NCF4 gene, supporting a role for the NADPH-oxidase complex in autoimmunity.
Abstract : Rheumatoid arthritis (RA) is a chronic inflammatory disease with a heritability of 60%. Genetic contributions to RA are made by multiple genes, but only a few gene associations have yet been confirmed. By studying animal models, reduced capacity of the NADPH-oxidase (NOX) complex, caused by a single nucleotide polymorphism (SNP) in one of its components (the NCF1 gene), has been found to increase severity of arthritis. To our knowledge, however, no studies investigating the potential role played by reduced reactive oxygen species production in human RA have yet been reported. In order to examine the role played by the NOX complex in RA, we investigated the association of 51 SNPs in five genes of the NOX complex (CYBB, CYBA, NCF4, NCF2, and RAC2) in a Swedish case-control cohort consisting of 1,842 RA cases and 1,038 control individuals. Several SNPs were found to be mildly associated in men in NCF4 (rs729749, P = 0.001), NCF2 (rs789181, P = 0.02) and RAC2 (rs1476002, P = 0.05). No associations were detected in CYBA or CYBB. By stratifying for autoantibody status, we identified a strong association for rs729749 (in NCF4) in autoantibody negative disease, with the strongest association detected in rheumatoid factor negative men (CT genotype versus CC genotype: odds ratio 0.34, 95% confidence interval 0.2 to 0.6; P = 0.0001). To our knowledge, this is the first genetic association identified between RA and the NOX complex, and it supports previous findings from animal models of the importance of reactive oxygen species production capacity to the development of arthritis.
Author : Olsson LM,Lindqvist AK,Kallberg H,Padyukov L,Burkhardt H,Alfredsson L,Klareskog L,Holmdahl R,
Source : Arthritis Res Ther. 2007;9(5):R98.
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No.Polymorphism nameGene SymbolEntrez Gene ID
1 rs796860 NCF2 4688
2 rs789181 NCF2 4688
3 rs11811630 NCF2 4688
4 rs2296164 NCF2 4688
5 rs2236384 NCF2 4688
6 rs2236385 NCF2 4688
7 rs3843293 NCF2 4688
8 rs2274064 NCF2 4688
9 rs3818364 NCF2 4688
10 rs699242 NCF2 4688
11 rs10797888 NCF2 4688
12 rs3845466 NCF2 4688
13 rs699240 NCF2 4688
14 rs789192 NCF2 4688
15 rs2274065 NCF2 4688
16 rs4821544 NCF4 4689
17 rs760517 NCF4 4689
18 rs746713 NCF4 4689
19 rs909484 NCF4 4689
20 rs760519 NCF4 4689
21 rs729749 NCF4 4689
22 rs2284027 NCF4 4689
23 rs2072708 NCF4 4689
24 rs3827352 NCF4 4689
25 rs3788523 NCF4 4689
26 rs738148 NCF4 4689
27 rs2075939 NCF4 4689
28 rs6572 RAC2 5880
29 rs8137698 RAC2 5880
30 rs2284037 RAC2 5880
49 records 1/2 page Next  1  2 
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