| No. | Polymorphism name | Entrez Gene ID | Gene Symbol | Chromosome | Start Location | End Location | Number of References |
|---|---|---|---|---|---|---|---|
| 1 | rs2476601 | 26191 | PTPN22 | 1 | 114356433 | 114414375 | 48 |
| 2 | rs1800629 | 7124 | TNF | 6 | 31543344 | 31546113 | 28 |
| 3 | rs7574865 | 6775 | STAT4 | 2 | 191894302 | 192016322 | 22 |
| 4 | rs231775 | 1493 | CTLA4 | 2 | 204732511 | 204738683 | 17 |
| 5 | rs1800896 | 3586 | IL10 | 1 | 206940948 | 206945839 | 17 |
| 6 | rs7528684 | 115352 | FCRL3 | 1 | 157647978 | 157670647 | 16 |
| 7 | rs1800795 | 3569 | IL6 | 7 | 22766766 | 22771621 | 16 |
| 8 | rs6920220 | NA | NA | NA | NA | NA | 16 |
| 9 | rs3087243 | 1493 | CTLA4 | 2 | 204732511 | 204738683 | 15 |
| 10 | rs16944 | 3553 | IL1B | 2 | 113587337 | 113594356 | 14 |
| 11 | rs3761847 | 7185 | TRAF1 | 9 | 123664671 | 123691451 | 14 |
| 12 | rs1801133 | 4524 | MTHFR | 1 | 11845787 | 11866160 | 13 |
| 13 | rs396991 | 2214 | FCGR3A | 1 | 161511549 | 161520413 | 12 |
| 14 | rs3087456 | 4261 | CIITA | 16 | 10971055 | 11018840 | 12 |
| 15 | rs1801131 | 4524 | MTHFR | 1 | 11845787 | 11866160 | 12 |
| 16 | rs874881 | 23569 | PADI4 | 1 | 17634690 | 17690495 | 12 |
| 17 | rs2240340 | 23569 | PADI4 | 1 | 17634690 | 17690495 | 12 |
| 18 | rs6822844 | NA | NA | NA | NA | NA | 12 |
| 19 | rs361525 | 7124 | TNF | 6 | 31543344 | 31546113 | 12 |
| 20 | HLA-DRB1*0401 | 3123 | HLA-DRB1 | 6 | 32546546 | 32557613 | 11 |
| 21 | HLA-DRB1*0404 | 3123 | HLA-DRB1 | 6 | 32546546 | 32557613 | 11 |
| 22 | rs1748033 | 23569 | PADI4 | 1 | 17634690 | 17690495 | 11 |
| 23 | rs2812378 | 6366 | CCL21 | 9 | 34709002 | 34710147 | 11 |
| 24 | rs4810485 | 958 | CD40 | 20 | 44746906 | 44758384 | 11 |
| 25 | rs10818488 | NA | NA | NA | NA | NA | 11 |
| 26 | HLA-DRB1*0405 | 3123 | HLA-DRB1 | 6 | 32546546 | 32557613 | 10 |
| 27 | HLA-DRB1 SE | 3119 | HLA-DQB1 | 6 | 32627241 | 32634466 | 10 |
| 28 | rs10499194 | NA | NA | NA | NA | NA | 10 |
| 29 | rs3890745 | 79258 | MMEL1 | 1 | 2522081 | 2564481 | 10 |
| 30 | rs4986790 | 7099 | TLR4 | 9 | 120466453 | 120479769 | 10 |